#NEXUS

Begin DATA;
	dimensions ntax=14 nchar=313;
	format interleave datatype=protein missing=X gap=-;
	
	matrix
	LmjF30.2980   INGFGRIGRMVLQAICDQGLIGNEIDVVAVVDMSTNAEYFAYQMKYDTVHGRPDVLVVNGHRIKCVKAQRN-PADLPWGKLGVDYVIESTGLFTDKLQAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYTSHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAINIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRSTRETSIQEIDKAIKKATYMKDILGFTNDELVSSDFINDNRSSVYDSKATLQNNLPGEKRFFKIVSWYDNEWG
	Q4Q6Z4_LEIMA  INGFGRIGRMVLQAICDQGLIGNEIDVVAVVDMSTNAEYFAYQMKYDTVHGRPDVLVVNGHRIKCVKAQRN-PADLPWGKLGVDYVIESTGLFTDKLQAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYTSHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAINIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRSTRETSIQEIDKAIKKATYMKDILGFTNDELVSSDFINDNRSSVYDSKATLQNNLPGEKRFFKIVSWYDNEWG
	G3PG_CRIFA    INGFGRIGRMVFQSMCEDNVLGTELDVVAVVDMSTDAEYFAYQMKFDTVHGRPDVLVVNGHRILCVKADRN-PADLPWGKLGVDYVIESTGLFTDKAKAEGHVKGGAKKVVISAPASGGAKTIVMGVNQHEYATHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSIKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDAALKKATYMKGILGFTDEELVSSDFINDARSSIYDSKATLQNNLPGEKRFFKVVSWYDNEWG
	O96424_9TRYP  INGFGRIGRMVFQAMCEQGVLGKDFDVVAVVDMSTDAEYFAYQMKYDSVHGKPDVLVVNGHRIQCVKAQRN-PADLPWSKLGVEYVIESTGLFTNKAKAEGHLKGGAKKVIISAPASGGAKTIVMGVNNQEYSSHSVVSNASCTTNCLAPLVHVLLKEGFGVETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAMNIIPSTTGAAKAVGEVLPVTKGKLTGMSFRVPTPDVSVVDLTFTAAKDTSIKEIDEAFKRATYMKGILSYTDEELVSSDFYNNNNSSIYDSKATLQNNLPGEKRFFKVVSWYDNEWG
	O96426_9TRYP  INGFGRIGRNVFQAICEGNHLGTDIDVVAVADMSTDAEYFSYQIVDDSVHGKPDVLVVNGHRIQCVKAARN-PADLPWGKLDIEYVIESTGLFTKKTQAEGHIKGGAKKVVISAPASGGVKTIVMGVNEKEYSSHHIVSNASCTTNCLAPLVHVLTKEGFGLETGLMTTIHSYTATQKTVDGVSIKDWRGGRAAAINIIPSTTGAAKAVGEVIPTTKGKLTGMAFRVPTPDVSVVDLTFTATRDTSIKEIDAALKKATYIKGILSFTDEELVSTDFINDNHSSIYDSKATLQNNLPNEKRFFKLVSWYDNEWG
	G3PG_TRYBB    INGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFDTLVVNGHRILCVKAQRN-PADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYREQHVVSNASCTTNCLAPLVHVLVKEGFGISTGLMTTVHSYTATQKTVDGVSVKDWRGGRAAALNIIPSTTGAAKAVGMVIPSTQGKLTGMAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRATYMKNILGYTDEELVSADFISDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWG
	A1YE37_9EUGL  INGFGRIGRMVFQAIADQGLLGKEIEVVAVVDMSTDADYFAYQMKYDSVHGKFNVIVVNGQKILCVQAVRN-PADLPWGKLGVEYVIESTGLFTSKDAAEGHIKGGAKKVIISAPASGGAKTIVMGVNHEEYTKHHVVSNASCTTNCLAPLVHVLTKEGFGIETGLMTTIHSYTATQKTVDGVSIKDWRGGRAAAQNIIPSTTGAARAVGEVLPVTKGKLTGMSFRVPTPDVSVVDLTFRTSKDTSIKEIDAALKKATYLKNILGFTDEELVSTDFIHDNRSSIYDAKATLQNNLPNEKRFFKVVSWYDNEWG
	A1YE38_9EUGL  INGFGRIGRMVFQAICDQGLLGTEIDLVAVVDMSTDADYFTYQMKYDSVHGRADVIVVNGHRIQCIKATRN-PADLPWGKLGVEYVIESTGLFTEKDKAEGHIKAGAKKVIISAPAKGGVKTLVMGVNHEEYATHHVVSNASCTTNCLAPLVHVLMKEGFGVETGLMTTIHAYTATQKTVDGVSLKDWRGGRAAACNIIPSTTGAAKAVGEVLPATKGKLTGMSFRVPVPDVSVVDLTFTTKKDTSIKEIDAALKKATYLKNFLGFTDEELVSTDFIHNTHSSIYDSLATLQNNLPNEKRFFKVVSWYDNEWG
	O97105_TRYRA  INGFGRIGRMVFQAMCEADLLGTEIEVVAVVDMSTDAEYFAYQLRYDSVHGRLDVLVVNGHRILCVRAQRN-PADLPWGKLGVEYVIESTGLFTSKAAAEGHLRGGARKVIISAPASGGAKTLVMGVEPRGYREHHVVSNASCTTNCLGXIVHVLVKEGFGVETGLMTTIHSNTATQKTVDGVSHRDWRGGRAAAINVIPSTTGAAKAVGMVIPSMQGKLTGMAFRVPTADVSVVDLTFTAKRDTSIKEIDAALKRATYMKGILGFTNEELVSTDFINDDRSSXYDSLATLQNNLPNERRFFKVVSWYDNEWG
	Q5ZPF6_TRYCR  IRPFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFDTLVVNGHRILCVKAQRN-PADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYSEHHVVSNASCTTNCLAPIVHVLVKERFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRATYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNNLPKERRFFKIVSXXXXXXX
	Q43311_EUGGR  INGFGRIGRMVFQALCDQGLLGTTFDVVGVVDMATDADYFAYQMKYDSVHGKFDIIVVNGHEIKCIMATRN-PEDLPWGKLGVEYVVESTGLFTEADKARGHLKAGAKKVIISAPGKGDLKTIVMGVNHTEYASMDVVSNASCTTNCLAPLVHVLLKEGVGVEKGLMTTIHAYTATQKTVDGPSKKDWRGGRAAAINIIPSTTGAAKAVGEVLPAVKGKLTGMAFRVPTPDVSVVDLTFLAEKDTSIKEIDSLLKKATYLKGILGFTDEELVSTDFVHDNRSSIYDSLATLQNNLPGEKRLFKVVSWYDNEWG
	Q26753_TRYBO  INGFGRIGRMVLQAICDQGLLGTEIDVVAVVVRSPDADYLSYRLRYDSVHGRFDTLVVNGHKVKCVKGGPD-PSTLPWGKLGVDYVIESTGFFTDKSKAEGHIKAGAKKVIISAPAKGGAKTIVMGVNQHEYNEHSVVSNASCTTNGLAPIVHVLNKEGFGIKVGLITTLHAYTATQKTVDGVSQKDWRGGRAASVNIIPSSTGAAKAVGEVLPETKGKLTGMAFRVPTPDVSVVDLTFTTTKDTSIKEIDAALKRASYLRGILDISKEELVSTDFIHNPNSSIYDSLATLQNNLPTEKRFFKVVSWYDNEWG
	A1XIQ6_9TRYP  XXXXXXXXXXXXXXXXXXXXXXXXXDVVAVVDMSTDAEYFAYQMRYDSVHGKPDVLVVNGHRILCVKAQRN-PAELPWGKLGVDYVIESTGLFTDKLKAEGHLKGGAKKVIISAPASGGAKTIVMGVNQNEYSADHVVSNASCTTNCLAPLVHVLTKEGFGIQTGLMTTIHSYTATQKPVDGVSMKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFVANRDTSIQEIDAALKKATYMKNILGFTDEELVSADFINDSRSSIYDSKATLQNXXXXXXXXXXXXXXXXXXXX
	Q76EI0_9DINO  INGFGRIGRMVFQAICDQNLLGTKLDVVGVVDMSTDAEYFAYQMKYDTVHGRFDELIVNGNKIKCIQASREGPKALPWKEMGVEYVIESTGLFVEAEKAAGHIEAGAKKVIISAPGKGDLKTLVCGVNHTEYANHNVVSNASCTTNCLAPIVHVLLKEGVGIEKGLMTTIHSYTATQKTVDGVSAKDWRGGRAASCNIIPSATGAAKAVGEVLPTTKGKLTGMAFRVPTPDVSVVDLTFTAEKDTSIEEIDALFKKATYMKGVLSFTDEELVSADFIHNVNSSIYDSKATLQNNLKGEKRFFKIVSWYDNEWG

;
End;

begin mrbayes;
  mcmcp filename=g3pdh.mb;
  prset aamodelpr=mixed;
  lset rates=equal;
  prset brlenspr=unconstrained:exponential(10.00);
  mcmcp ngen=200000 samplefreq=100 printfreq=100;
  mcmcp nruns=2 diagnfreq=1000 burninfrac=0.250000;
  mcmcp stoprule=yes stopval=0.004000;
  mcmcp nchains=4 swapfreq=1 temp=0.200000;
[ EDIT FILE AND REMOVE OUTCOMMENT BRACKETS AS NEEDED ]
[  mcmc; ]
[  sump burnin=XXX; ]
[  sumt contype=halfcompat burnin=XXX; ]
end;